Chapter Two

Applications of New Genetics in Food and Agriculture


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Overview
Commercial cultivation of transgenic crops
    
Figure 2.1 Commercially cultivated genetically modified crops 2002  
Emerging scientific discoveries for addressing complex traits
    
Table 2.1. Complex traits being addressed through emerging science

Note: For references cited within this chapter, direct links are provided to the appropriate section of the Annotated Bibliography

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Applications of modern genetics are being used to improve the efficiency and sustainability of agricultural practices today. For example, recent discoveries have led to:

·      Better understanding of how plants function, and how they respond to the environment.

·      More targetted selection objectives in breeding programs to improve the performance and productivity of crops, trees, livestock and fish, and post harvest quality of food.

·      Use of molecular markers for smarter breeding, by enabling early generation selection for key traits, thus reducing the need for extensive field selection.

·      Molecular tools for the characterization, conservation and use of genetic resources

·      New molecular diagnostics, to assist in the improved diagnosis and management of parasites, pests and pathogens

·      New vaccines to protect livestock and fish against lethal diseases. 

Such applications, which are already making substantial contributions to agriculture in both industrial and developing countries, use information derived from modern genetics and new molecular techniques. (For examples, see: CGIAR 2000a; IFPRI 2001; ISNAR 2002b; ICSU 2002; Agricultural Biotechnology Country Case Studies, Persley and MacIntyre, 2001; Serageldin and Persley, 2003).

New scientific discoveries in modern genetics, and particularly gene technology, also provide options for the targeted introduction of transgenic strains that are genetically modified for one or more traits. Transgenic strains are produced by means of recombinant DNA technologies (gene technologies) that enable the movement of genes between species that do not normally cross in nature. Although transgenic strains of various species of crops, trees, livestock and fish have been developed experimentally, only transgenic crop varieties are in widespread commercial use in agriculture today.

Agrobacterium-mediated gene transfer in plants

In plants, the process of genetic engineering was driven by the discovery that a common soil borne bacterium and plant pathogen, Agrobacterium tumifaciens, had a means by which it naturally transferred some of its own bacterial DNA into targetted plant cells, and this transfer and integration of bacterial DNA into the plant cells then caused the plant cells to produce new compounds for the bacterium to use. It is this naturally occurring transformation process that provided the scientific basis for genetic engineering in plants. A recent report by the French Academies des sciences (2002) highlights the importance of this fundamental discovery about Agrobacterium, as the basis for genetic engineering in plants.

Agrobacterium is now being used as a biological transfer agent to move one or more genes from bacteria to plants, from plant to plant, and theoretically from any other organism into plants. For example, insect resistant plants contain toxin-producing genes from the bacterium, Bacillus thuringensis  (Bt) introduced into cotton, corn and other crops. Herbicide-tolerant soybean contains genes isolated from soil-borne bacteria. A modified strain of Agrobacterium tumifaciens is also being used for the biological control of crown gall disease, the first genetically modified organism to be released into the environment for commercial use (Kerr, 1991). 

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Commercial cultivation of transgenic crops

The first transgenic plants were produced experimentally in 1983, by means of Agrobacterium-mediated gene transfer. The commercial cultivation of transgenic crops began in 1995. By 2002, there were approximately 58.6 million hectares of genetically modified crops growing in sixteen countries (ISAAA 2002b). These crops are mainly soybean, corn, cotton and oil seed rape (canola), with resistance to certain insects and/or herbicide tolerance (Figure 2.1).  Many other crop/trait combinations are under investigation.

Figure 2.1 Commercially cultivated genetically modified crops 2002  

 

Source: ISAAA CropBiotech Briefs Vol.3 No.1, 2003

 

Broadly, the first wave of genetically modified crops, which are in commercial use, address production traits; the second wave, which are mainly under development, address quality and/or nutritional traits; and the third wave address complex stress response traits and novel products able to be produced in plants. The scientific basis of dealing with each of these groups of traits is increasingly complex (ICSU 2002).

Several socio-economic studies have assessed the benefits derived from specific applications of genetically modified crops and other applications of modern genetics in agriculture. For example, the benefits derived from Bt cotton are documented in several countries, including Australia, China, South Africa and the USA (eg ISAAA 2002a; Pray et al 2002, Pardey et al 2002). 

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Emerging scientific discoveries for addressing complex traits

Most characteristics of food are controlled by more than one gene. Thus taste, aroma, colour, nutritional composition and other aspects of food quality are the result of complex biochemical reactions within the plant before and after harvest. Emerging scientific developments are enabling complex traits that controlled by multiple genes to be addressed, with the intention of developing new products of potential value for food and agriculture, human health and the environment (for examples, see Table 2.1). The attractiveness of the new targets is tempered by the fact that they are technically difficult, requiring the expression and control of several genes, which are often involved in different biochemical pathways. The scientific basis of these developments in genomics, proteomics and metabolomics and related areas is reviewed in a companion ICSU publication on Biotechnology and Sustainable Agriculture (ICSU 2002). 


Table 2.1.  Complex traits being addressed through emerging science   

Target

Trait

Illustrative crops

Improved productivity

Drought tolerance

Salinity tolerance

Aluminum tolerance

Disease resistance

corn

rice

tobacco

rice

Health benefits

Vitamin A content

Iron content

Reduced toxins

Modified starch for low glycemic index

Modified fatty acid content of oil crops

rice, mustard

rice

cassava

barley, wheat


oilseeds, coconut (enriched for omega three fatty acids)

Value added traits

Colour changes

Flavour changes

flowers

tomato

Plants for medicinal purposes

Vaccine production

banana , potato,
tomato, tobacco

Plants for industrial purposes

Biodegradable plastic production

Starch production

Alcohol production

corn


corn

sugarcane

Self regulating” plants

Limiting gene flow to related and/or wild species

oilseed rape

Removing toxic compounds from the environment (bioremediation)

Mercury pollution

Cadmium contamination

Arabidopsis thaliana

tobacco

Source: Modified from van Montagu and Burssens In: ICSU 2002.


These emerging scientific possibilities also pose new challenges in the assessments of the risks and benefits of potential new products to human health, biodiversity and the environment. Some of the potential products are meant for food or feed use, while others are intended for use as pharmaceuticals, and others as compounds for industrial uses. Some will require inter-specific transfer and control of multiple genes. Others will rely on switching on (or off) and better regulating genes that are already present in the organism but not usually expressed. New scientific developments also offer potential means to overcome some of the risks in the cultivation of genetically modified crops and other living modified organisms (for example, by limiting gene flow to related and/or wild species).

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